BioXGEM.PAComplex: Download

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Peptide Antigens and TCR-pMHC Complex Download Peptide family Complex / Interface Peptide Candidates

Downloads Summarized results of a query protein sequence Protein  :  sp|P03155|DPOL_HBVD1 Number of query  :  743 peptides Hit peptides  :  3 peptides (Z-value > 4) Complex / Interface : Modeling TCR-pMHC complexes : Template Rank Peptide ⇒ Your selection Template : MHC : A chain TCR : HL chain pepitde : C chain Query peptide : 3cvh 1 SYQRFRRL 2 IILGFRKI 3 KPPSFPNI 4 MPLSYQRF 5 LVVDFSQF 6 FYPNFTKY 7 IKECFRKL 8 HCLAFSYM 9 RLSSNSRI 10 DFSQFSRG 11 HALELHNL 12 VSAAFYHL 13 SKHQQSRL 14 TVNEKRRL 15 SPYSWEQE 16 ADEDLNRR 17 AVPNLQSL 18 RKLPVHRP 19 PKFAVPNL 20 KLIMPARF 21 YRVSWPKF 22 RIINHQHG 23 KYLPLDKG 24 LEEELPRL 25 SKQAFTFS 26 LVMGHQRM 27 QDHIIHKI 28 KPYYPEHL 29 HHIRIPRT 30 AICSVVRR 31 RVHPTARR 32 HPAAMPHL 33 QQGHLARR 34 NSVVLSRK 35 LVNHYFQT 36 PARFYPNF 37 VNHYFQTR 38 EDLNLGNL 39 RSRSGANI 40 GLLGFAAP 41 NPNKTKRW 42 WWLQFRDS 43 YLSHIVNL 44 LLAQFTSA 45 HNANLASK 46 SLQSKHQQ 47 STVPVFNP 48 GAESFHQQ 49 NRRVAEDL 50 LAACFARS 51 AVSTSENH 52 SSLQSKHQ 53 KVGNFTGL 54 PLTVNEKR 55 NLYPVAEQ 56 VRRAFPHC 57 LCQVFADA 58 SASCLYQS 59 HNTAESRL 60 SVQHLESL 61 KAGVLYKR 62 NSRIINHQ 63 SDYYLSHI 64 GVFLVDKN 65 KIKECFRK 66 QHGILQNL 67 SRIINHQH 68 TVPVFNPH 69 SLLLLYKT 70 KPCSDYYL 71 YLHTLWKA 72 GSLPQDHI 73 HDSCSRNL 74 MPARFYPN 75 NPHNTAES 76 FAAPFTQC 77 YSLNFMGY 78 SPFLLAQF 79 PNIHLHQD 80 HLVNHYFQ 81 LSRYVARL 82 TFSPTYKA 83 ACFARSRS 84 PRLADEDL 85 QYLNLYPV 86 GSSGLSRY 87 AFLCKQYL 88 RTAAYPAV 89 TQCGYPAL 90 YFQTRHYL 91 NLQSLTNL 92 AGVLYKRV 93 ERPVFPCW 94 TSENHSSS 95 PHNTAESR 96 LFTAVTNF 97 SSGILSRP 98 LSSNLSWL 99 SIRARVHP 100 STHSASFC 101 PPNSARSQ 102 SVVRRAFP 103 KAFLCKQY 104 AEHGEHHI 105 TYKAFLCK 106 NANLASKS 107 LCKQYLNL 108 SWSIRARV 109 FSPTYKAF 110 LSRKYTSF 111 PIHTAELL 112 PSFPNIHL 113 KCEQFVGP 114 GAKSVQHL 115 SIPWTHKV 116 SRLVVDFS 117 ASKSASCL 118 NHYFQTRH 119 VVLGAKSV 120 LTVNEKRR 121 SWPKFAVP 122 SVVLSRKY 123 ILQNLHDS 124 ACIQSKQA 125 SNSRIINH 126 PVFNPHWK 127 HQHGILQN 128 RVAEDLNL 129 APLPIHTA 130 SFPNIHLH 131 ANLASKSA 132 SPTYKAFL 133 STSENHSS 134 LIMPARFY 135 SRLGLQSQ 136 QFSRGNYR 137 RSWSIRAR 138 ARLSSNSR 139 HIVNLLED 140 PLSYQRFR 141 TRHYLHTL 142 RPFGVEPS 143 LPIHTAEL 144 IHLNPNKT 145 VVLSRKYT 146 KLHLYSHP 147 LSSNSRII 148 HQDIIKKC 149 SSGHALEL 150 SGHNANLA 151 HNLPPNSA 152 SRSGANIL 153 HLESLFTA 154 YQSPVRTA 155 AACFARSR 156 NEKRRLKL 157 SARSQSER 158 KSASCLYQ 159 DEDLNRRV 160 LYKTFGWK 161 AVTNFLLS 162 YPNFTKYL 163 SRGNYRVS 164 CIQSKQAF 165 YPEHLVNH 166 DKNPHNTA 167 LSLDVSAA 168 QRPGLCQV 169 GLSRYVAR 170 PFLLAQFT 171 HYFQTRHY 172 QTRHYLHT 173 RFYPNFTK 174 QAFTFSPT 175 SLNFMGYV 176 NHSSSGHA 177 PVRTAAYP 178 LSYQRFRR 179 ASCLYQSP 180 PCSDYYLS 181 HSSSGHAL 182 AESFHQQS 183 LAFSYMDD 184 PNSARSQS 185 RVTGGVFL 186 VSIPWTHK 187 LMPLYACI 188 RRQQGRSW 189 AFSYMDDV 190 HSASFCGS 191 YSWEQELQ 192 LPPNSARS 193 PEHLVNHY 194 ELHNLPPN 195 RLGLQSQQ 196 NFTGLYSS 197 QSKQAFTF 198 GYPALMPL 199 GNLNVSIP 200 SFCGSPYS 201 NILGTDNS 202 IKPYYPEH 203 ICSVVRRA 204 LLLDDEAG 205 DVVLGAKS 206 SGHALELH 207 LYPVAEQR 208 CWGSLPQD 209 AAYPAVST 210 QSKHQQSR 211 PYSWEQEL 212 NLHDSCSR 213 NFTKYLPL 214 HLNPNKTK 215 TNLLSSNL 216 KSVQHLES 217 CAEHGEHH 218 SGSGHNAN 219 SRNLYVSL 220 GPLTVNEK 221 HPTARRPF 222 RGTFLAPL 223 DVSAAFYH 224 VDFSQFSR 225 KLPVHRPI 226 LNLGNLNV 227 WKLHLYSH 228 FLLAQFTS 229 ARSQSERP 230 RRAFPHCL 231 LYACIQSK 232 PCWWLQFR 233 FLVDKNPH 234 FSRGNYRV 235 LQHGAESF 236 LHLYSHPI 237 LVDKNPHN 238 RLVVDFSQ 239 RRLKLIMP 240 QVFADATP 241 SQFSRGNY 242 PLYACIQS 243 AYPAVSTS 244 HGEHHIRI 245 PIILGFRK 246 SLDVSAAF 247 CSDYYLSH 248 LYQSPVRT 249 VPVFNPHW 250 IIHKIKEC 251 RPPVGSSL 252 SLTNLLSS 253 SCSRNLYV 254 DWKVCQRI 255 LLLLYKTF 256 PQDHIIHK 257 CFARSRSG 258 MRGTFLAP 259 SERPVFPC 260 CQVFADAT 261 QRMRGTFL 262 YKAFLCKQ 263 RARVHPTA 264 YPVAEQRP 265 QGHLARRQ 266 KRVSTHSA 267 GSGHNANL 268 SFHQQSSG 269 SAAFYHLP 270 CSVVRRAF 271 LNVSIPWT 272 PVGSSLQS 273 ESFHQQSS 274 GIHLNPNK 275 LDVSAAFY 276 EDLNRRVA 277 GHLARRQQ 278 NLGNLNVS 279 WEQELQHG 280 LNPNKTKR 281 YHLPLHPA 282 RSQSERPV 283 AELLAACF 284 HKIKECFR 285 ARFYPNFT 286 KTKRWGYS 287 LPLHPAAM 288 QHLESLFT 289 IRARVHPT 290 LQSKHQQS 291 QELQHGAE 292 TAVTNFLL 293 ALMPLYAC 294 YKRVSTHS 295 SSGLSRYV 296 GLSPFLLA 297 CSRNLYVS 298 VLYKRVST 299 HKVGNFTG 300 ARRQQGRS 301 FPHCLAFS 302 RNLYVSLL 303 QSSGILSR 304 PTYKAFLC 305 VSTHSASF 306 TGLYSSTV 307 LESLFTAV 308 FTFSPTYK 309 RVSWPKFA 310 SNLSWLSL 311 PAVSTSEN 312 NLPPNSAR 313 PVAEQRPG 314 LDKGIKPY 315 PLHPAAMP 316 HLARRQQG 317 SRPPVGSS 318 SKPCSDYY 319 VFLVDKNP 320 KQAFTFSP 321 PVFPCWWL 322 LHQDIIKK 323 SSTVPVFN 324 EHLVNHYF 325 LSHIVNLL 326 PHWKPPSF 327 IIKKCEQF 328 YVARLSSN 329 FPCWWLQF 330 SLFTAVTN 331 CGSPYSWE 332 SLPQDHII 333 HIIHKIKE 334 HLYSHPII 335 CEQFVGPL 336 SLGIHLNP 337 ARRPFGVE 338 PSGSGHNA 339 FTAVTNFL 340 VAEQRPGL 341 NIHLHQDI 342 NTAESRLV 343 WGYSLNFM 344 VDKNPHNT 345 VMGHQRMR 346 LYKRVSTH 347 IPRTPARV 348 LQSQQGHL 349 VSTSENHS 350 TKRWGYSL 351 YACIQSKQ 352 VCQRIVGL 353 QFRDSKPC 354 PAAMPHLL 355 SRKYTSFP 356 HPIILGFR 357 SWEQELQH 358 VIGCWGSL 359 GLVMGHQR 360 LDDEAGPL 361 GILQNLHD 362 GILSRPPV 363 EKRRLKLI 364 NSARSQSE 365 QSQQGHLA 366 DSKPCSDY 367 SSSGHALE 368 HQRMRGTF 369 YKTFGWKL 370 GIKPYYPE 371 GTDNSVVL 372 FHQQSSGI 373 MGVGLSPF 374 LLLLDDEA 375 VHRPIDWK 376 VVRRAFPH 377 VFADATPT 378 VTNFLLSL 379 WTHKVGNF 380 LSLGIHLN 381 LLAACFAR 382 PALMPLYA 383 QFTSAICS 384 GEHHIRIP 385 LGIHLNPN 386 SGANILGT 387 QQGRSWSI 388 FTGLYSST 389 VARLSSNS 390 LHDSCSRN 391 DNSVVLSR 392 RWGYSLNF 393 FTSAICSV 394 NFMGYVIG 395 HTAELLAA 396 PHCLAFSY 397 KRWGYSLN 398 GSSLQSKH 399 AFPHCLAF 400 LKLIMPAR 401 IVNLLEDW 402 PCAEHGEH 403 INHQHGIL 404 YQRFRRLL 405 SRYVARLS 406 CLAFSYMD 407 VGSSLQSK 408 LARRQQGR 409 FNPHWKPP 410 FAVPNLQS 411 SCLYQSPV 412 TLWKAGVL 413 AAFYHLPL 414 HLLVGSSG 415 SENHSSSG 416 QCGYPALM 417 HGAESFHQ 418 NLASKSAS 419 GLQSQQGH 420 TFGWKLHL 421 LADEDLNR 422 GFRKIPMG 423 DIIKKCEQ 424 CWWLQFRD 425 RVSTHSAS 426 GNYRVSWP 427 LQFRDSKP 428 YMDDVVLG 429 GHQRMRGT 430 WLQFRDSK 431 KHQQSRLG 432 TARRPFGV 433 PYYPEHLV 434 LLSSNLSW 435 LLGFAAPF 436 HRPIDWKV 437 RGNYRVSW 438 KIPMGVGL 439 MPLYACIQ 440 GPLEEELP 441 LNFMGYVI 442 NLLSSNLS 443 IINHQHGI 444 WSIRARVH 445 ELLAACFA 446 IQSKQAFT 447 LASKSASC 448 LLVGSSGL 449 QSRLGLQS 450 IDWKVCQR 451 FLCKQYLN 452 SASFCGSP 453 RYVARLSS 454 GLCQVFAD 455 KFAVPNLQ 456 DDVVLGAK 457 EHGEHHIR 458 KGIKPYYP 459 VVDFSQFS 460 GVGLSPFL 461 VFNPHWKP 462 ELPRLADE 463 HIRIPRTP 464 RAFPHCLA 465 SGLSRYVA 466 LAQFTSAI 467 CKQYLNLY 468 VHPTARRP 469 RLADEDLN 470 VAEDLNLG 471 PRTPARVT 472 TFLAPLPI 473 ILGTDNSV 474 RRVAEDLN 475 VRTAAYPA 476 SQSERPVF 477 PFTQCGYP 478 RLKLIMPA 479 RIPRTPAR 480 SQQGHLAR 481 PNFTKYLP 482 WKPPSFPN 483 RTPARVTG 484 IHLHQDII 485 KKCEQFVG 486 FARSRSGA 487 LQNLHDSC 488 TDNSVVLS 489 KNPHNTAE 490 RQQGRSWS 491 FGWKLHLY 492 KTFGWKLH 493 LLEDWGPC 494 HLPLHPAA 495 DSCSRNLY 496 QSPVRTAA 497 AFTFSPTY 498 PPSFPNIH 499 ESRLVVDF 500 HQQSSGIL 501 PLEEELPR 502 SPVRTAAY 503 QGRSWSIR 504 YSSTVPVF 505 RMRGTFLA 506 PNLQSLTN 507 LLSLGIHL 508 LGFAAPFT 509 KECFRKLP 510 MGYVIGCW 511 FRDSKPCS 512 LLYKTFGW 513 ARSRSGAN 514 IRIPRTPA 515 LYSSTVPV 516 EPSGSGHN 517 LLDDEAGP 518 LGTDNSVV 519 CLYQSPVR 520 GFAAPFTQ 521 WKAGVLYK 522 VNEKRRLK 523 DHIIHKIK 524 LHNLPPNS 525 SYMDDVVL 526 LPLDKGIK 527 FLAPLPIH 528 RPGLCQVF 529 VGLSPFLL 530 FGVEPSGS 531 KQYLNLYP 532 QFVGPLTV 533 LNRRVAED 534 AAPFTQCG 535 RPVFPCWW 536 RPIDWKVC 537 FTKYLPLD 538 QNLHDSCS 539 LHPAAMPH 540 PPVGSSLQ 541 ENHSSSGH 542 QHGAESFH 543 WKVCQRIV 544 FQTRHYLH 545 VSLLLLYK 546 LSPFLLAQ 547 FSQFSRGN 548 RLLLLDDE 549 TAELLAAC 550 AQFTSAIC 551 FCGSPYSW 552 PLPIHTAE 553 CQRIVGLL 554 AGPLEEEL 555 ELQHGAES 556 LPQDHIIH 557 LYVSLLLL 558 CFRKLPVH 559 PHLLVGSS 560 ARVHPTAR 561 TGGVFLVD 562 VSWPKFAV 563 FPNIHLHQ 564 VEPSGSGH 565 DKGIKPYY 566 ECFRKLPV 567 RDSKPCSD 568 LTNLLSSN 569 IPMGVGLS 570 HQQSRLGL 571 LHTLWKAG 572 ALELHNLP 573 FSYMDDVV 574 IVGLLGFA 575 IMPARFYP 576 AFYHLPLH 577 WGLVMGHQ 578 TPTGWGLV 579 GNFTGLYS 580 GHNANLAS 581 TAAYPAVS 582 QDIIKKCE 583 TPARVTGG 584 RFRRLLLL 585 GVLYKRVS 586 QQSRLGLQ 587 SWLSLDVS 588 GRSWSIRA 589 YSHPIILG 590 MDDVVLGA 591 PGLCQVFA 592 SKSASCLY 593 GCWGSLPQ 594 PNKTKRWG 595 GGVFLVDK 596 TSAICSVV 597 SGILSRPP 598 PVHRPIDW 599 FLLSLGIH 600 VTGGVFLV 601 PLDKGIKP 602 YLNLYPVA 603 THSASFCG 604 VLSRKYTS 605 YVIGCWGS 606 FMGYVIGC 607 WLSLDVSA 608 FTQCGYPA 609 LELHNLPP 610 THKVGNFT 611 GTFLAPLP 612 QRFRRLLL 613 EELPRLAD 614 PIDWKVCQ 615 AKSVQHLE 616 RSGANILG 617 AAMPHLLV 618 DLNRRVAE 619 FADATPTG 620 NYRVSWPK 621 CGYPALMP 622 LPRLADED 623 RIVGLLGF 624 LSRPPVGS 625 HLHQDIIK 626 LAPLPIHT 627 LGNLNVSI 628 QSERPVFP 629 LPVHRPID 630 EQFVGPLT 631 HTLWKAGV 632 PTARRPFG 633 PFGVEPSG 634 VNLLEDWG 635 NLYVSLLL 636 NLNVSIPW 637 SHPIILGF 638 IPWTHKVG 639 LGLQSQQG 640 LYSHPIIL 641 FRKLPVHR 642 LVGSSGLS 643 IKKCEQFV 644 PWTHKVGN 645 HWKPPSFP 646 YPAVSTSE 647 VLGAKSVQ 648 YLPLDKGI 649 NLLEDWGP 650 LQSLTNLL 651 DYYLSHIV 652 ASFCGSPY 653 EQELQHGA 654 ATPTGWGL 655 TGWGLVMG 656 DATPTGWG 657 WPKFAVPN 658 RKIPMGVG 659 SHIVNLLE 660 FYHLPLHP 661 AESRLVVD 662 DWGPCAEH 663 GSPYSWEQ 664 GANILGTD 665 LLLYKTFG 666 EAGPLEEE 667 HGILQNLH 668 EEELPRLA 669 GVEPSGSG 670 EHHIRIPR 671 YYPEHLVN 672 LGFRKIPM 673 NPHWKPPS 674 SSNSRIIN 675 AEQRPGLC 676 LEDWGPCA 677 APFTQCGY 678 DLNLGNLN 679 NVSIPWTH 680 GLYSSTVP 681 QQSSGILS 682 KVCQRIVG 683 VQHLESLF 684 YYLSHIVN 685 ARVTGGVF 686 PARVTGGV 687 SAICSVVR 688 RRPFGVEP 689 IHKIKECF 690 NHQHGILQ 691 ILSRPPVG 692 ESLFTAVT 693 GWGLVMGH 694 NKTKRWGY 695 TAESRLVV 696 HYLHTLWK 697 ILGFRKIP 698 LNLYPVAE 699 ADATPTGW 700 QSLTNLLS 701 EQRPGLCQ 702 MGHQRMRG 703 LSWLSLDV 704 YPALMPLY 705 VFPCWWLQ 706 FVGPLTVN 707 GYSLNFMG 708 FRKIPMGV 709 PMGVGLSP 710 GHALELHN 711 GWKLHLYS 712 IHTAELLA 713 WGSLPQDH 714 TNFLLSLG 715 MPHLLVGS 716 LGAKSVQH 717 TKYLPLDK 718 QRIVGLLG 719 VGSSGLSR 720 ANILGTDN 721 GPCAEHGE 722 NLSWLSLD 723 RRLLLLDD 724 VGLLGFAA 725 DEAGPLEE 726 NFLLSLGI 727 DDEAGPLE 728 VPNLQSLT 729 RHYLHTLW 730 AMPHLLVG 731 WGPCAEHG 732 VGNFTGLY 733 KRRLKLIM 734 LWKAGVLY 735 AEDLNLGN 736 FRRLLLLD 737 EDWGPCAE 738 SSNLSWLS 739 GYVIGCWG 740 PTGWGLVM 741 YVSLLLLY 742 VGPLTVNE 743 IGCWGSLP Template structure of TCR-pMHC : 3cvh                   Peptide family of the template structure : 3cvh